Pairwise Alignments

Query, 170 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 18/110 (16%)

Query: 26  DRYTSKEMTAEILK-GIELPSS--VFSEICIGCGGCKNACPTNAIEMIPVEPVKITETYS 82
           D Y   E   E  K  I LP      +E C+GCG C + CP  A+ +   + V       
Sbjct: 106 DSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAV------- 158

Query: 83  KEAIPKIDYDKCIYCLYCHDFCPVFALF--NEVSPIHPRHVGEDIIQVDL 130
                 +D D CIYC  C   CP  A+F   + SP   +++ +  +  DL
Sbjct: 159 ------VDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDL 202



 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 29/99 (29%)

Query: 46  SVFSEICIGCGGCKNACPTNAI---EMIPVE--------------PVKITETYSKEAIPK 88
           SV S++CIGCG C + CP + I   EM+ V               PV   E   + A PK
Sbjct: 197 SVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPK 256

Query: 89  --------IDYDKCIYCLYCHDFCPVFALFNEVSPIHPR 119
                    D +KC YC  C   CP     N ++ ++P+
Sbjct: 257 PITDEGIVWDEEKCAYCGPCAIKCP----NNAITVVNPK 291



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 11/73 (15%)

Query: 39  KGIELPSSVFSE------ICIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKIDYD 92
           KG+E+PS   +E      +CI CG C  +CP +A+ +      KI     +    +   +
Sbjct: 291 KGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRI-----GKIIHNGKEYERIEFSPN 345

Query: 93  KCIYCLYCHDFCP 105
            C  C  C + CP
Sbjct: 346 LCDSCGKCIETCP 358



 Score = 33.9 bits (76), Expect = 3e-06
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 9/58 (15%)

Query: 50  EICIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKIDY--DKCIYCLYCHDFCP 105
           ++C  CG C N CP +A+ +  +E        + + I +I Y   KC  C  C   CP
Sbjct: 30  KVCQLCGNCVNVCPNDALNLREIE-------LNGKTIKQIAYFPTKCDLCGECVKVCP 80



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 19/61 (31%)

Query: 49  SEICIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKIDYDKCIYCLYCHDFCPVFA 108
           +E C  C  C+N+CPT A+++ P                   +  C  C  C + CP  A
Sbjct: 6   TEDCYMCKACENSCPTEALKLNP-------------------FKVCQLCGNCVNVCPNDA 46

Query: 109 L 109
           L
Sbjct: 47  L 47



 Score = 24.6 bits (52), Expect = 0.002
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 13/54 (24%)

Query: 51  ICIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKIDYDKCIYCLYCHDFC 104
           +C  CG C   CP + +++             K   P   +  C+ CL C + C
Sbjct: 346 LCDSCGKCIETCPYDMLKLT-----------GKSEKPLEGF--CVMCLKCIEAC 386