Pairwise Alignments

Query, 170 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 163 a.a., NADH ubiquinone oxidoreductase chain I from Agrobacterium fabrum C58

 Score = 40.8 bits (94), Expect = 1e-08
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 50  EICIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKIDYDKCIYCLYCHDFCPVFAL 109
           E CI C  C+  CP  AI  I   P +   T  +     ID  KCIYC +C + CPV A+
Sbjct: 61  ERCIACKLCEAICPAQAIT-IEAGPRRNDGT-RRTVRYDIDMVKCIYCGFCQEACPVDAI 118



 Score = 25.4 bits (54), Expect = 5e-04
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 92  DKCIYCLYCHDFCPVFALFNEVSP 115
           ++CI C  C   CP  A+  E  P
Sbjct: 61  ERCIACKLCEAICPAQAITIEAGP 84