Pairwise Alignments

Query, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 188 a.a., NADH-quinone oxidoreductase subunit NuoB from Magnetospirillum magneticum AMB-1

 Score = 82.8 bits (203), Expect = 3e-21
 Identities = 42/127 (33%), Positives = 77/127 (60%), Gaps = 8/127 (6%)

Query: 18  TGGCNGCDIEVVNCVLSPFYDAEQYNVFLTWNPREADVLVVTGCVTKAVSASLKKIYDEI 77
           T G   C +E+++   S  YD +++ V    +PR++D+++V G +T  ++ +L+++YD++
Sbjct: 62  TFGLACCAVEMMHAGCSR-YDMDRFGVVFRPSPRQSDLMIVAGTLTNKMAPALRRVYDQM 120

Query: 78  PEPKAVVAAGACALMGGVYNNIGADLGTSTFIDGPVENIIPVDVKVPGCPPRPEDVITGI 137
            EP+ V++ G+CA  GG Y+        S  +    + I+PVD+ VPGCPP  E ++ GI
Sbjct: 121 AEPRWVISMGSCANGGGYYH-------YSYSVVRGCDRIVPVDIYVPGCPPSAEALMYGI 173

Query: 138 VKALPKI 144
           ++   KI
Sbjct: 174 LQLQKKI 180