Pairwise Alignments

Query, 331 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 349 a.a., NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 40/340 (11%)

Query: 6   LTLETFEIILSMIGIPLIAFAISTWIPGI---QRKIQARIQQRKGPSISSP-----GFWA 57
           L  E   ++ ++IGI +IA  +   +  I    RKI A +  R+GP++  P      F  
Sbjct: 10  LPFEGAWLLSTIIGILVIALPLMLAVAMIIYADRKIWAAMALRRGPNVVGPLGLLQSFAD 69

Query: 58  IFKYLYKEAKEPVSDLPKLFKFMPLLSFIIVWMVLALTTVVHFHILSN-EIGIIGLLKIE 116
             K   +E   P +    LF   P+++F +  M  A+       ++SN  +G++ +L I 
Sbjct: 70  GLKVFLQETIVPSASNKALFLIAPIITFTVALMAWAVIPFGVGVMVSNVNVGLLYILAIS 129

Query: 117 EMSYIIMGSLASTVMGIRMPFIDECKGSGYLKTIKITLGQLSAVRAFKMITVGSFP--FY 174
            +  +    LA      + PF    + S  + + ++++G       F +ITV  +   F 
Sbjct: 130 SLG-VYGVVLAGWASNSKYPFYSAIRASAQMISYEVSIG-------FILITVVLWAGSFN 181

Query: 175 LATLLPFIPHKSIFLNNLIGNSFLFTLGGLFGALAYIIGYIIMTKDYPFSIMHTKADVIE 234
           ++ ++        FLN    N  LF +     A+ ++I  +  T   PF +   +++++ 
Sbjct: 182 MSAIVESQKGYYGFLNGNGFNPLLFPM-----AIMFLISAMAETARAPFDLTEAESELVA 236

Query: 235 GPTMEYSGKYRAFYLSVKELLMITLGSLFATLYLG-------IAPDILNPITIVMNFAVA 287
           G   EYS    A +   +   +I +  L A L+ G        AP  + P  I     +A
Sbjct: 237 GYQTEYSSMAFALFWLGEYANVILMCGLNAILFWGGYLPPFDWAPLYMVPGIIWFLLKIA 296

Query: 288 LVFPIISAVVSAYTPVFTFRQV--------YPVSLFATVL 319
             F + S  V A  P + + Q+         P SLF   L
Sbjct: 297 FFFFVFS-WVKATVPRYRYDQLMRLGWKIFLPTSLFFVFL 335