Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 436 a.a., Histidyl-tRNA synthetase (EC 6.1.1.21) from Variovorax sp. SCN45

 Score =  141 bits (355), Expect = 4e-38
 Identities = 125/424 (29%), Positives = 196/424 (46%), Gaps = 48/424 (11%)

Query: 6   KGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTG---DEIRTQLF 62
           KG  D LP E  + + +E  +R +   + +  + TP  E   L  +  G   D +  +++
Sbjct: 9   KGMNDILPPESARWEWLEATVRDLMGRFAYRNVRTPILERTALFVRGIGEVTDIVEKEMY 68

Query: 63  VFRDHGDRE-----MGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYR 117
            F D  D+      + +RPE T+ + R  I        P +L+Y    FR EN Q GR+R
Sbjct: 69  SFEDRADKHGKFEHLTMRPENTAGLVRAVIEHNMLYEGPKRLWYTGPMFRRENVQRGRFR 128

Query: 118 EFWQMGSELIGSKKPIADAEVVNMAIEGLKEINM-DFEIHIGHLGVLKGVFEKYNLSDDE 176
           +F Q+G+E +G   P  DAE++ +A    K I + D  + +  LG      E+     + 
Sbjct: 129 QFHQIGAEALGFAGPDVDAELILLANALWKAIGLTDVRLELNSLG---QPAERALHRTEL 185

Query: 177 GNEIRRLIDKEDMDGLKSVLSRLESEKNIEISKKVFEVLDLKGG--KEVIPILKEKLADF 234
                +  DK D DG +    RL S            +LD K    K+V+     KL DF
Sbjct: 186 IAHFEKHADKLDEDGKR----RLHSNP--------LRILDTKNPAMKDVVE-SAPKLIDF 232

Query: 235 --ESSVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAK-QVCGGGRY 291
               S+A  E L +IL+     + IN  + RGLDYY   VFE    + G++  VC GGRY
Sbjct: 233 LGAESLAHFEGLQAILKANDIAFTINPRLVRGLDYYNLSVFEFVTDRLGSQGTVCAGGRY 292

Query: 292 DNLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVENESIFVVPVKSSEMLLKE------CL 345
           D+LI    G+P+PAVG+A G +R++    D   E  +    PV  +  ++ +       L
Sbjct: 293 DDLIAQIGGKPAPAVGWAMGVERVL----DLLKEQGAEVPAPVPDAYAIVPDAASMPVAL 348

Query: 346 KIAKTLRDSGKSVEV------DLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKN 399
           +  + LR+SG  V++       L G K    +  A+       LI G +++  G+V+LK 
Sbjct: 349 RTLQQLRESGVRVQMHAATVDGLSGFKAQ--MKKADASGATYALIFGADELARGEVTLKA 406

Query: 400 METG 403
           +  G
Sbjct: 407 LRDG 410