Pairwise Alignments

Query, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

Subject, 458 a.a., potassium uptake protein from Agrobacterium fabrum C58

 Score = 99.8 bits (247), Expect = 8e-26
 Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 3/216 (1%)

Query: 3   IIVAGMGRVGISLA---KSLSGKGHDLVILDQNKKTCEEVAGEIDALVINGDCTKTKSLE 59
           I++AG G +G  +A   + +  K    +I     +           +V++G     K L 
Sbjct: 236 IVIAGAGNIGHFVAHKIEEMQSKTRVKIIEADRDRAIAASEQLSHTIVMHGSALDQKILM 295

Query: 60  NAGIEDADIFIAVTGNQEINLISGLIAKKFNVSKTIARVSEPDYKDVFESLGIGVVISPE 119
            A I+DAD+ + +T N + N+++ +IAK+      +A ++   + DV  SLG+   I+P 
Sbjct: 296 QADIQDADLIVTLTNNDQTNILAAVIAKQLGCKSNLALLNSTSFHDVARSLGLDAYINPR 355

Query: 120 LVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELGGTKDYVIIAIY 179
            V  + + + + +  +  +  V RG AE++E     TS +  +  R++       I AIY
Sbjct: 356 AVTISRVLQHVRKGRIRSVYAVQRGSAEVIEAEALETSPLVGQSFRDIDMPDGVRIGAIY 415

Query: 180 EGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVF 215
               +  PDGST++KA DR+++ A  D++ +V ++F
Sbjct: 416 RDGVVIRPDGSTKIKAKDRVVLFASADAVRDVEQLF 451



 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 11/232 (4%)

Query: 1   MYIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEIDALVINGDCTKTKSLEN 60
           M +I+ G G+VG  +A+ LS + +++ ++D        +   +D     G       L  
Sbjct: 1   MKVIICGAGQVGYGIAEQLSREDNEVSVIDTAAPLITAITETLDVRGYVGHGAHPDMLAK 60

Query: 61  AGIEDADIFIAVTGNQEINLISGLIAKK-FNVSKTIARVSE-----PDYKDVF--ESLGI 112
           AG + AD+ IAVT + EIN+++  +A   F+V   IAR+ +     P+Y D+F  E++ I
Sbjct: 61  AGADQADMIIAVTLHDEINIVACEVAHALFSVPTKIARIRDQSYMKPEYADLFSRENMSI 120

Query: 113 GVVISPELVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELGGT-K 171
            V ISPE+     + + I  PG  D+         +L +       V +  +++L     
Sbjct: 121 DVTISPEVEVGKMVLRRIAFPGATDVVRFAEDTIYMLAIECMEDCPVINTPLQQLSSLFP 180

Query: 172 DYV--IIAIYEGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVFSSENKE 221
           D +  ++ +Y    LK+   S +L+  D   ++ +         +F  E +E
Sbjct: 181 DLIATVVGVYRDGILKVAHSSEQLRVGDLAYVICQRQHARRTLSLFGHEEQE 232