Pairwise Alignments

Query, 358 a.a., tryptophan--tRNA ligase from Methanococcus maripaludis S2

Subject, 354 a.a., tryptophan-tRNA ligase from Agrobacterium fabrum C58

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 70/265 (26%), Positives = 104/265 (39%), Gaps = 45/265 (16%)

Query: 65  VVSGMMPSGKMHFGHKMVVDQLLYYQKYGADIYIPIADLEAYWARGMDFETTKKLAIEEY 124
           V SG+ P+G +H G+ +   +     +   D    + D+ A  A+ +  +   K      
Sbjct: 8   VFSGVQPTGNLHLGNYLGAIRKFVALQEDNDCIYCVVDMHAITAQLVHSDL--KAQTRSI 65

Query: 125 ITNYIALGLDPEKIHVYLQSKNETVKDLAM------RLSKRVNFTEMKGIYGFSGE-TNI 177
              +IA G+DP K  V+ QS      +LA       R+      T+ K   G + E  ++
Sbjct: 66  AAAFIAAGIDPVKHIVFNQSAVPQHAELAWVFNCVARIGWMERMTQFKDKSGKNAEQVSL 125

Query: 178 GHVFAPVVQVADILHPQLEKKVPVVVPVGIDQDPHIRLTRDIAGRYK-DF---------- 226
           G +  P +  ADIL  +        VPVG DQ  H+ L RDIA ++  DF          
Sbjct: 126 GLLAYPSLMAADILVYRATH-----VPVGDDQKQHLELARDIAQKFNIDFGGHIRNAGLG 180

Query: 227 ----KFIAPSSTYHRFITGLLGG-------------KMSSSKPE--TAIYLSDEPTKSFK 267
                   P   Y   +  L+GG             KMS S P   + I L D+   +  
Sbjct: 181 VNITVGDEPVHAYFPMVEPLIGGPAPRVMSLKDGTKKMSKSDPSDLSRINLMDD-VDAIS 239

Query: 268 KKVMSCKTGGRETLEEQKKLGGVPE 292
           KK+   KT       E + L G PE
Sbjct: 240 KKIKKAKTDPDALPSEVEGLKGRPE 264