Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 401 a.a., Carbamoyl-phosphate synthase small chain from Xanthobacter sp. DMC5

 Score =  256 bits (654), Expect = 7e-73
 Identities = 153/385 (39%), Positives = 217/385 (56%), Gaps = 33/385 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           +LVL DGT++ G G GA   + GE+ FNT++TGY EILTDPSY GQIIT T+P  GN G 
Sbjct: 23  LLVLADGTVLEGFGIGATGHLAGEVCFNTAITGYEEILTDPSYAGQIITFTFPHIGNVGT 82

Query: 64  EKEWFESDGIKA----EGFVVKDITG--------KELDEFLKEYNIPGISGVDTRYITRK 111
            +E  E+  + +     G V++            +  D++LK   IPGI+G+DTR +T  
Sbjct: 83  NEEDIETVSMASASGVRGVVLRTAVTDPSNYRATRHFDDWLKARGIPGITGIDTRALTAL 142

Query: 112 IRSKGVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVST------------K 159
           IR  G+  +++  + + +   E  +   +   +P +  +DLVP V++             
Sbjct: 143 IREAGMPNAVIAHAPDGVFDIEALKAEARA--WPGLVGMDLVPGVTSIQRFDWDETTWDP 200

Query: 160 ETVIYNAEDEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSN 219
           ET     E  +   V ID GVK++I+  L   GC V  VP  +  E+I++  PD V +SN
Sbjct: 201 ETGYGRQEAPRHHVVAIDYGVKRNILRLLARAGCKVTVVPATTSAEDILALQPDGVFLSN 260

Query: 220 GPGDPENMSE-TVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKD 277
           GPGDP    E  V  ++ +I   +P  GICLGHQ+I +A+GG+T K+  GH G N PVKD
Sbjct: 261 GPGDPAATGEYAVPVIQKVIEKGVPTFGICLGHQMIGLAVGGRTVKMHQGHHGANHPVKD 320

Query: 278 VESGKVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHP 337
           + +GKV ITS NHGFA D   +P  +   H++L D +  GI   +       V+SVQYHP
Sbjct: 321 LTTGKVEITSMNHGFAVDRDSLPKNAVETHVSLFDGSNAGIALAD-----KPVFSVQYHP 375

Query: 338 EAGPGPHDARFLFDEMVELGIKFKA 362
           EA PGP D+ +LFD  V +  K KA
Sbjct: 376 EASPGPQDSHYLFDRFVTMIEKHKA 400