Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 378 a.a., Carbamoyl-phosphate synthase small chain from Pseudomonas putida KT2440

 Score =  273 bits (699), Expect = 4e-78
 Identities = 153/376 (40%), Positives = 211/376 (56%), Gaps = 33/376 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           IL L DG+I RGE  GA+ + +GE+VFNT+MTGY EILTDPSY  QI+T+TYP  GN G 
Sbjct: 6   ILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTGT 65

Query: 64  EKEWFESDGIKAEGFVVKDI--------TGKELDEFLKEYNIPGISGVDTRYITRKIRSK 115
             E  ES  + + G V++D+          + L E+LK  N+  I+G+DTR +TR +R K
Sbjct: 66  TPEDAESSRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILREK 125

Query: 116 GVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIY----------- 164
           G     +    N      E   +     +P +  +DL   VSTKE   +           
Sbjct: 126 GAQNGCILAGDNI----SEEAAIAAARGFPGLKGMDLAKVVSTKERYEWRSSVWELKTDS 181

Query: 165 ----NAEDEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNG 220
               +A D     V  D GVK +I+  LV RGC V  VP  +   E+++ NPD V +SNG
Sbjct: 182 HPTIDAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241

Query: 221 PGDPENMSETVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVE 279
           PGDPE     ++ +K ++   +PV GICLGHQ++ +A G KT K+  GH G N PV+D++
Sbjct: 242 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASGAKTVKMGHGHHGANHPVQDLD 301

Query: 280 SGKVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEA 339
           +G V ITSQNHGFA D+  +P     +H +L D T++GI + + S      +S Q HPEA
Sbjct: 302 TGVVMITSQNHGFAVDEATLPGNVRAIHKSLFDGTLQGIERTDKS-----AFSFQGHPEA 356

Query: 340 GPGPHDARFLFDEMVE 355
            PGP D   LFD   +
Sbjct: 357 SPGPTDVAPLFDRFTD 372