Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 401 a.a., carbamoyl-phosphate synthase small subunit from Magnetospirillum magneticum AMB-1

 Score =  280 bits (715), Expect = 6e-80
 Identities = 161/376 (42%), Positives = 224/376 (59%), Gaps = 29/376 (7%)

Query: 3   GILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYG 62
           G LVL DG+++ G+G GA    +GE+VF T MTGY E LTDPS+ GQ+IT T+P  GN G
Sbjct: 28  GALVLADGSVLWGKGIGATGSNVGEVVFTTGMTGYQETLTDPSFAGQVITFTFPHVGNVG 87

Query: 63  VEKEWFESDGIKAEGFVVK-DIT-------GKELDEFLKEYNIPGISGVDTRYITRKIRS 114
              E  E+    A G +++ DIT        K LD +LK  NI G+ GVDTR +TR+IR+
Sbjct: 88  TNVEDLETTTPAARGLILRADITDPANWRSAKHLDSWLKANNIVGLCGVDTRALTRRIRA 147

Query: 115 KGVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYNAEDEKTR-- 172
           KG    ++  +  P    +   L  K   +P +  +DL  +V+  +T  ++  +   R  
Sbjct: 148 KGAPNGVIVNA--PDGAFDLPALWGKAAGWPGLEGMDLARDVTCAQTYSWDETEWSLRGG 205

Query: 173 ----------CVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNGPG 222
                      V +D G K++I+ CL E GC V  +P  +  E++++  PD V +SNGPG
Sbjct: 206 YGRQAKPRFHVVAVDFGAKRNILRCLAETGCKVTVLPAEATAEQVLALEPDGVFLSNGPG 265

Query: 223 DPENMSE-TVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVES 280
           DP       V  ++ +I    P+ GICLGHQ++ +ALG KT+K+  GHRG N PVKD+E+
Sbjct: 266 DPAATGTYAVPMIQGVIKSGKPLFGICLGHQMLGLALGAKTFKMDTGHRGANHPVKDLET 325

Query: 281 GKVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEAG 340
           GKV ITSQNHGF  D+K +PAG ++ H +L D +VEGI    + D K  V+SVQYHPEA 
Sbjct: 326 GKVEITSQNHGFVVDEKSLPAGVKVTHRSLFDGSVEGI----AVDGK-PVFSVQYHPEAS 380

Query: 341 PGPHDARFLFDEMVEL 356
           PGP DA +LF+  V L
Sbjct: 381 PGPQDAHYLFERFVGL 396