Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 382 a.a., carbamoyl phosphate synthase small subunit from Escherichia coli ECRC101

 Score =  286 bits (731), Expect = 8e-82
 Identities = 157/377 (41%), Positives = 215/377 (57%), Gaps = 33/377 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           +LVLEDGT   G   GA    +GE+VFNTSMTGY EILTDPSY  QI+T+TYP  GN G 
Sbjct: 6   LLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGT 65

Query: 64  EKEWFESDGIKAEGFVVKDI--------TGKELDEFLKEYNIPGISGVDTRYITRKIRSK 115
                ES  + A+G V++D+          ++L  +LK +NI  I+ +DTR +TR +R K
Sbjct: 66  NDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREK 125

Query: 116 GVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYNA--------- 166
           G     +    NP    +    L+K   +P ++ +DL  EV+T E   +           
Sbjct: 126 GAQNGCIIAGDNP----DAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGL 181

Query: 167 -----EDEKT-RCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNG 220
                EDE     V  D G K++I+  LV+RGC +  VP  +  E+++  NPD + +SNG
Sbjct: 182 PEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNG 241

Query: 221 PGDPENMSETVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVE 279
           PGDP      +  ++  +   +PV GICLGHQ++ +A G KT K+KFGH GGN PVKDVE
Sbjct: 242 PGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVE 301

Query: 280 SGKVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEA 339
              V IT+QNHGFA D+  +PA   + H +L D T++GI + +        +S Q HPEA
Sbjct: 302 KNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTD-----KPAFSFQGHPEA 356

Query: 340 GPGPHDARFLFDEMVEL 356
            PGPHDA  LFD  +EL
Sbjct: 357 SPGPHDAAPLFDHFIEL 373