Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 401 a.a., carbamoylphosphate synthase small chain from Agrobacterium fabrum C58

 Score =  245 bits (626), Expect = 1e-69
 Identities = 155/390 (39%), Positives = 210/390 (53%), Gaps = 35/390 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           +LVL DGT+I G G GA  +V  E+ FNT++TGY EILTDPSY GQI+T T+P  GN G 
Sbjct: 15  MLVLADGTVIEGTGIGATGKVQAEVCFNTALTGYEEILTDPSYLGQIVTFTFPHIGNVGT 74

Query: 64  EKEWFESDGIKAE----GFVVK-DITG-------KELDEFLKEYNIPGISGVDTRYITRK 111
            +E  E     A     G + K DIT        K LD +LK   + G+ G+DTR +T  
Sbjct: 75  NEEDIEDLTPAARRGAVGVIFKADITDPSNFRAVKHLDAWLKARGVIGLCGIDTRALTAW 134

Query: 112 IRSKGVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYNAE---- 167
           IR  G   +++    N +   E  +   K   +  +  +DL  E ++ ++  +       
Sbjct: 135 IRENGAPNAVIAHDPNGVFDIEALKAEAKA--WSGLVGLDLAIEATSGQSSTWTETPWVW 192

Query: 168 ----------DEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLV 217
                     D K   V +D GVK++I+       C V  VP  +  E+I++  PD V +
Sbjct: 193 NKGYGTLGEADAKYHVVCVDFGVKRNILRLFAGLDCKVTVVPAQTSAEDILALKPDGVFL 252

Query: 218 SNGPGDPENMSE-TVETVKNLI-GMLPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPV 275
           SNGPGDP    E  V  ++NLI   LP+ GICLGHQ++ +A+G KT K+  GH G N PV
Sbjct: 253 SNGPGDPAATGEYAVPVIQNLIKSELPIFGICLGHQMLGLAVGAKTEKMHQGHHGANHPV 312

Query: 276 KDVESGKVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQY 335
           KD  +GKV I S NHGFA D K +P G E  H +L D T  G+R      +   V+SVQ+
Sbjct: 313 KDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLR-----IVGKPVFSVQH 367

Query: 336 HPEAGPGPHDARFLFDEMVELGIKFKAEKA 365
           HPEA PGP D+ +LF   V L  + K E A
Sbjct: 368 HPEASPGPQDSHYLFRRFVNLLRENKGEAA 397