Pairwise Alignments

Query, 137 a.a., EamA family transporter from Methanococcus maripaludis S2

Subject, 283 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 17/141 (12%)

Query: 6   LGLLAAVLYGIGTFF-----AKVVSNEDPY-----LQWIIVNIVGIVLCVILFGGKCRNL 55
           +GLLAA+L+G GT F     A+ V  +        L ++I+ ++ ++L  +LF       
Sbjct: 1   MGLLAALLWG-GTDFLVGLNARAVGVKRAVYFGQALGFLIMTLLLVILPSLLFKS----- 54

Query: 56  LDYPNKVLIYGVIAAILVICGTLALYYGLNKGKASVVVPLSSIGPAITTVLAIIFLKEQL 115
           L+    V + G+ AA+L + G LAL      GKA++V PL +    +TT+L+     E +
Sbjct: 55  LEAALSVWLLGIAAALLTVSGALALSKAFALGKAAIVAPLVTSYGVVTTLLSWA-SGEHI 113

Query: 116 SFTQIAGIAMILSGVIVLSIN 136
           S TQ+  IA+ + GVI+ S++
Sbjct: 114 SLTQLGCIALCVIGVILSSLH 134



 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)

Query: 4   VILGLLAAVLYGIGTFFAK--VVSNEDPYLQWIIVNIVGIVLCVILFGGKCRNLLDYPNK 61
           +   +LAA+LYG   +      +    P     +  +VG+ + V++       L   P K
Sbjct: 148 IAYAMLAALLYGTSFWLQGRYTLPALGPITMLWLGYLVGLCVLVMMVLKITDGLKIPPLK 207

Query: 62  VLIYGVIAAILVICGTLALYYGLNKGKASVVVPLSSIGPAITTVLAIIFLKEQLSFTQIA 121
                  A+++ + G  A  +G   G  SVV  +S++   I  +L  +F KE+LS  Q+ 
Sbjct: 208 NCATLTGASLMNLGGFSAFSWGAMAGSVSVVTVISTLSGGIAAILGFVFFKERLSAVQVL 267

Query: 122 GIAMILSGVIVLSI 135
           G+ ++L G +VL I
Sbjct: 268 GVVLVLVGAVVLHI 281