Pairwise Alignments

Query, 633 a.a., IGHMBP2 family helicase from Methanococcus maripaludis S2

Subject, 2207 a.a., DNA helicase-related protein from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 2e-12
 Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 66/275 (24%)

Query: 380  FDIAVIDEGSQSTEPSSLIPIVRSRKLIIAGDHKQLPPTVLSD-----------ELELKK 428
            FD+ + DE SQ     ++  + R +++++ GD KQLPPT   D           E +L+ 
Sbjct: 1555 FDLVIFDEASQIPVWDAIGAMARGKQVVMVGDPKQLPPTSFFDRAESTAEDEDVEADLES 1614

Query: 429  TLFERMIQEHPEFSKILQVQYR-MNEKIMEFSNEMFYENKLIAHESVKSQNLLEIVENVS 487
             L E +    P   + L   YR  +E ++ FSN+ +Y +KL+   S              
Sbjct: 1615 ILDECISANLP--MRNLNWHYRSRHESLIAFSNQRYYGSKLVTFPS-------------- 1658

Query: 488  NEDKDIINEKPLQFINVDGEEKQNSFKSSYNVEEAEKVLEIVSKLQKYEI-----PVSVI 542
                    +K ++   V G   +   +++  +E    V ++V++LQ          V V+
Sbjct: 1659 ----PFTADKAVKLCPVAGVYDKGGSRTNL-IEARALVADLVARLQSSAFRESRRTVGVV 1713

Query: 543  TPYDAQVKYISKMLN-----------------TDKIDVKSVDGFQGRENEVIVISFVRTS 585
            T    Q K I  ML+                  + + VK+++  QG E ++I  S     
Sbjct: 1714 TFNGEQQKLIMDMLDEACRKDPSLDSYFAESELEPVFVKNLESVQGDERDIIYFSTTYGK 1773

Query: 586  KMGFLKDL-----------KRLNVAVTRAKRKLIV 609
                +  +           +RLNVA+TRA+++L++
Sbjct: 1774 DAAGVMSMNFGPMNRPGGERRLNVAITRARQELVL 1808



 Score = 42.7 bits (99), Expect = 2e-07
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 22/180 (12%)

Query: 102 NHVDVSMEIVPKWALNDIRIDLYVNDVTFKRMLNALDKFNSTDNRLIDIILS--VDSPQK 159
           N V  +++ +P W L++   D+ ++  +F + L   D   + ++     ++   +D+P+ 
Sbjct: 606 NKVGHAIKDIPGWELSE---DVVLSMFSFAKYLMWKDLAENAEHLRQSPVVQHLLDTPRD 662

Query: 160 SKTTEVRF-------LDYRLNEY---------QKEAVLEALAARDLYLIHGPPGTGKTST 203
           S  ++  F        DY   +          Q  AV+ A   +D  LI GPPGTGK+ T
Sbjct: 663 SFVSDTPFPEAESLDRDYGPTDVFCPLPSDSSQLSAVMAAAKGKDFVLI-GPPGTGKSQT 721

Query: 204 ISEVILQEALRKNKVIATADSNIAVDNILSNISKHESFKIVRIGHPSRISKKLIKYSLQT 263
           IS +I Q   +  +V+  ++   A+D +   + +    +     H S+  K  +   LQ+
Sbjct: 722 ISNMIAQSIAQGRRVLFVSEKIAALDVVYRRLREIGLGEFCLELHSSKARKTDVLAQLQS 781