Pairwise Alignments

Query, 633 a.a., IGHMBP2 family helicase from Methanococcus maripaludis S2

Subject, 1741 a.a., ATP-dependent RecD-like DNA helicase from Azospirillum sp. SherDot2

 Score = 97.4 bits (241), Expect = 5e-24
 Identities = 91/345 (26%), Positives = 149/345 (43%), Gaps = 80/345 (23%)

Query: 328  MADWVICSENIAKTKENVQKFEKKLIDDIISTSDVVVATNSMAGSEILE-DYKFDIAVID 386
            M DW+    ++     N ++F       ++ T  +V  T    GS  L     FD+ +ID
Sbjct: 1383 MDDWI---GHVGSRHRNFEEF-------LVGTRQIVCGTCVGLGSLSLGLKSNFDLVIID 1432

Query: 387  EGSQSTEPSSLIPIVRSRKLIIAGDHKQLPPTVLSDEL------------ELKKTLFERM 434
            E ++ T     +P+   +++I+ GDH QLPP  + + +            E++++ FER 
Sbjct: 1433 EAARCTAGELAVPMQSGKRVILVGDHMQLPPFHVGEYVAETAKRIGIPREEVRRSDFERT 1492

Query: 435  IQE--HPEFSKILQVQYRMNEKIMEFSNEMFYENKLIAH--------ESVKSQNLLEIVE 484
                      + L++QYRM E I    +E+FY +  + H        E     NL + V 
Sbjct: 1493 FTSPYGKAVGQTLRIQYRMIEPIGRLVSEVFYRDSPLKHGRAAPKVQEGTWPGNLSKAVV 1552

Query: 485  NVSNEDKDIINEKPLQFINVDGEEKQNSFKSSYNVEEAEKVLEIVSKLQKY--------- 535
             +     D        F   D E K +  KS  N  E   V+ ++  L ++         
Sbjct: 1553 WI-----DTAKAGARAF---DTEAKHS--KSRQNTAEERAVMRLLRDLDRHEPFQAWLQT 1602

Query: 536  --------EIPVSVITPYDAQVKYISKMLNT--------DKIDVKSVDGFQGRENEVIVI 579
                    E P+ +I  Y AQV  I K L +        + I V +VD +QG+EN ++++
Sbjct: 1603 NRAADKPLEYPIGIICTYTAQVNLIKKSLLSARISPALRESIRVDTVDSYQGKENLMVIL 1662

Query: 580  SFVR------------TSKMGFLKDLKRLNVAVTRAKRKLIVVGS 612
            S VR            T K GFL    R+NVA++RA  +L++VG+
Sbjct: 1663 SLVRNNEDGPQGDAGKTIKQGFLSQPHRINVALSRAMDRLVIVGT 1707



 Score = 46.2 bits (108), Expect = 1e-08
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 170  YRLNEYQKEAVLEALAARDLYLIHGPPGTGKTSTISEVILQEALR---KNKVIATADSNI 226
            YRLNE Q +A         L L+ GPPGTGKT+ I+  I+  AL      +++  + ++ 
Sbjct: 1078 YRLNESQVQAFQILWTTGPLGLLQGPPGTGKTTFIA-AIIHHALTVGGARRILLASQAHE 1136

Query: 227  AVDNILSNI-----SKHESFKIVRIGHPSRISKKLIKY 259
            AVDN    +        E+  +VR+G+ + +S  +  Y
Sbjct: 1137 AVDNAAKGVIDLFAEAGETISLVRVGYKNDLSDTVRPY 1174