Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 258 a.a., hydrolase TatD from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 61/226 (26%), Positives = 117/226 (51%), Gaps = 20/226 (8%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEK-YGIYVTLGY 66
           ID+H H++    +  R +++  +    V+ MV  G    + +R  +L +   G++   G 
Sbjct: 4   IDTHTHLDFPDFDSDRREVLAHSRALGVRRMVVLGVYQQNWQRLWDLVQTDEGLFAAFGL 63

Query: 67  HPGRVNADDNA---IEKVYNFIRSKE--KEILAVGEIGLDFDAENI--ERQENIFKKFIN 119
           HP  V  DD+    + ++ +++      +++ AVGEIGLD+  E +  ERQ+++F+  + 
Sbjct: 64  HP--VYLDDHRPADLTELGDWLTRLHGHRQLCAVGEIGLDYFLEQLDRERQQSLFEAQLK 121

Query: 120 LSKEVNKPVVIHARGMEERSYDILKNDVI---SMYHCYSGSLELAKELIKNGNFISYSTL 176
           L+ +   P ++H R         LK   +    + H ++GS E A+E IK G  +     
Sbjct: 122 LAVDFQLPALLHVRRSHADVIATLKRIRLPRGGIIHAFAGSREEAREYIKLGFKLGLGGA 181

Query: 177 VCFSE---HHKNLVKNLGLENVVVETDSPYLSP--IKGEKNEPKNV 217
             + +    HK ++ +L L+ VV+ETDSP ++P    G++N P+++
Sbjct: 182 ATWPQALRMHK-VLAHLPLDAVVLETDSPDMAPAMYPGQRNSPEHL 226