Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 286 a.a., Putative deoxyribonuclease YjjV from Variovorax sp. SCN45

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 15/213 (7%)

Query: 8   YIDSHCHVEDKSLNKYREDIVKRAFEKKVQM-VTSGTNLGSCRRAVELKEKYGIYVTLGY 66
           +ID+HCH++          I  RA    V M V       + +   EL  + G    LG 
Sbjct: 4   FIDTHCHLDAHEFGAEMPAIRARAAGLGVAMCVIPAVGAFNFQTVRELAHRQGDAYALGI 63

Query: 67  HP----GRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENI--ERQENIFKKFINL 120
           HP       +AD  A++   +  R  +  ++AVGEIGLD+  E +  +RQE  F   + L
Sbjct: 64  HPLCTGAAADADLEALDAELS-ARRDDPRLVAVGEIGLDYFVEGLDADRQERFFHTQLQL 122

Query: 121 SKEVNKPVVIHARGMEERSYDILKNDV-----ISMYHCYSGSLELAKELIKNGNFISYST 175
           +++   P++IH R   ++    L+        + + H ++GS + A   I  G  + +  
Sbjct: 123 ARKHGLPILIHVRRSVDKVLKHLRQTAGGKPWLGIAHAFNGSEQQAGACIALGLKLGFGG 182

Query: 176 LVCFSE--HHKNLVKNLGLENVVVETDSPYLSP 206
            V F      + L  +L +E++V+ETD+P + P
Sbjct: 183 AVTFERALQLRRLAASLPIESIVMETDAPDIQP 215