Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 265 a.a., Mg-dependent cytoplasmic DNase / RNase from Pseudomonas putida KT2440

 Score = 79.7 bits (195), Expect = 5e-20
 Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 22/237 (9%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-----IYV 62
           ID   ++ + S +  +  IV+RA E  V QM+ +GT+L    +A+EL ++       ++ 
Sbjct: 4   IDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQLDASGAHLFA 63

Query: 63  TLGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENIER--QENIFKKFINL 120
           T G HP    A D   E+    + S E  + AVGE GLDF+ +   R  QE   +  + L
Sbjct: 64  TAGVHPHDAKAWDTDSERQLRLLLS-EPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTL 122

Query: 121 SKEVNKPVVIHARGMEERSYDILKN--DVI--SMYHCYSGSLELAKELIKNGNFISYSTL 176
           + ++  PV +H R   ER   ILK+  D +  ++ HC++G  E     +     I  +  
Sbjct: 123 AAQLRLPVFLHERDASERLLAILKDYRDHLTGAVVHCFTGEREALFAYLDLDLHIGITGW 182

Query: 177 VCFSE---HHKNLVKNLGLENVVVETDSPYLSP------IKGEKNEPKNVINVIETI 224
           +C      H   LV N+    +++E+D+PYL P       K  +NEP  +  V+  +
Sbjct: 183 ICDERRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREV 239