Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 258 a.a., putative metal-dependent hydrolase YjjV from Pseudomonas sp. DMC3

 Score = 75.9 bits (185), Expect = 8e-19
 Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 16/234 (6%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKYG-IYVTLGY 66
           IDSH H++    +  R  ++  +    V+ +V  G + G+ +R  +L +    +Y   G 
Sbjct: 4   IDSHTHLDFPDFDADRAALLAESRALGVRRIVVLGVHQGNWQRVWDLVQSDADLYAAFGL 63

Query: 67  HPGRVNA----DDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENI--ERQENIFKKFINL 120
           HP  ++     D +A+      +R   +++ AVGEIGLD+  EN+  ERQ+ +F+  + L
Sbjct: 64  HPVFLDQHRPEDLHALGDWLTRLRG-HRQLCAVGEIGLDYFIENLDRERQQALFEAQLQL 122

Query: 121 SKEVNKPVVIHARGMEERSYDILKNDVI---SMYHCYSGSLELAKELIKNGNFISYSTLV 177
           + +   P +IH R         LK   +    + H ++GS E A+E IK G  +      
Sbjct: 123 AADFELPALIHVRRSHAAVIATLKRFKLKRAGIIHAFAGSREEAREYIKLGFKLGLGGAP 182

Query: 178 CFSE--HHKNLVKNLGLENVVVETDSPYLSP--IKGEKNEPKNVINVIETIWEL 227
            + +      ++  L L++VV+ETDSP ++P    G++N P ++  +   + EL
Sbjct: 183 TWPQALRMHRVLPELPLQSVVLETDSPDMAPAMFPGQRNSPAHLPAICAALAEL 236