Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 270 a.a., Putative deoxyribonuclease YcfH from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 39/272 (14%)

Query: 8   YIDSHCHVEDKSLNKYREDIVKRAFEKKVQMVTSGTNLGSCRRAVELKEKYGI------- 60
           + DSHCH+    L     DI++   + +V        L  C    E ++ Y +       
Sbjct: 2   FTDSHCHLSFPELRAQLPDILEAMSQAQVDRA-----LCICTTLEEFEDVYSLARDHDHL 56

Query: 61  YVTLGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF------DAENIERQENIF 114
           + T+G HP      +  +E +    R+    ++ +GE GLD+         ++E Q   F
Sbjct: 57  WSTVGVHPDSDEVQEPTLEDLLE--RAARPRVVGIGETGLDYYRLGERTVADMEWQRERF 114

Query: 115 KKFINLSKEVNKPVVIHARGMEERSYDILKND-------------VISMYHCYSGSLELA 161
           +  I  +++ + P+VIH R   + +  IL+ +                ++HC++ S+ +A
Sbjct: 115 RVHIRAARQTSLPLVIHTRSSSDDTVAILREEGGFASDSRAGQGPAKGVFHCFTESMAVA 174

Query: 162 KELIKNGNFISYSTLVCF--SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNV 217
           +  +  G FIS+S ++ F  +   + +   + L+  ++ETDSPYL+P+  +G+ N P  V
Sbjct: 175 RAALDLGFFISFSGILTFRNAADLREVAAYVPLDRTLIETDSPYLAPVPYRGKTNTPAYV 234

Query: 218 INVIETIWELKKDEYSMDEITKIIYNNTKRLY 249
             V   + ELK    S++ + +    N ++L+
Sbjct: 235 PFVARQVAELK--GLSVEAVAEATSRNFEQLF 264