Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 259 a.a., TatD family deoxyribonuclease from Magnetospirillum magneticum AMB-1

 Score =  100 bits (249), Expect = 3e-26
 Identities = 71/256 (27%), Positives = 137/256 (53%), Gaps = 18/256 (7%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKY-GIYVTLGY 66
           +DSHCH++        + +V RA    V  ++T GT++    + V++ E++  ++ T+G 
Sbjct: 3   VDSHCHLDFPDFADDLDGVVGRAGAAGVGVLLTIGTHVTRYDQVVKVAERFDNVWATVGI 62

Query: 67  HPGRVNADDNAIEKVYNFIRSKEK-EILAVGEIGLDF--DAENIERQENIFKKFINLSKE 123
           HP     +  A   +   +R  E  +++A GE GLD+  D    E+Q + F+  I  ++ 
Sbjct: 63  HPHEAGVEPYA--DLDTLLRLAEHPKVVAFGETGLDYYYDKSPREQQRHSFRIHIEAARR 120

Query: 124 VNKPVVIHARGMEERSYDILKNDV-----ISMYHCYSGSLELAKELIKNGNFISYSTLVC 178
              PV++H R  ++ +  IL  ++       + HC+S   + A++ +K G FIS S ++ 
Sbjct: 121 TGLPVIVHTRDADDDTAAILAEEMGKGAFTGLIHCFSSRPDFAEKAVKLGLFISASGIMT 180

Query: 179 F--SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDEYSM 234
           F  ++  ++ +  + L+ ++VETD+PYL+PI  +G++NEP  V +    + E+K    +M
Sbjct: 181 FKTADILRDTLAGVPLDRLLVETDAPYLAPIPFRGKRNEPAYVAHTAARLAEVK--GVTM 238

Query: 235 DEITKIIYNNTKRLYR 250
            E+     +N  RL++
Sbjct: 239 AEMETATTDNFHRLFK 254