Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 265 a.a., Putative deoxyribonuclease YcfH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  108 bits (269), Expect = 1e-28
 Identities = 78/258 (30%), Positives = 146/258 (56%), Gaps = 20/258 (7%)

Query: 9   IDSHCHVED---KSLNKYREDIVKRAFEKKVQMVTS-GTNLGSCRRAVELKEKY-GIYVT 63
           +DSHCH++    +SL+K  +D++ +A  + V+   +  T L   R   +L  K   +  +
Sbjct: 4   VDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVATTLPGYRHMRKLVGKRDNVVFS 63

Query: 64  LGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLS 121
            G HP  +N D+ A +     + + E +++A+GE GLD+    E   RQ+  F   I + 
Sbjct: 64  CGVHP--LNQDE-AYDVEELRLLAAEDDVVAMGETGLDYFYTPETKIRQQASFIHHIQIG 120

Query: 122 KEVNKPVVIHARGMEERSYDILKNDVIS----MYHCYSGSLELAKELIKNGNFISYSTLV 177
           +E++KPV++H R     +  IL+ + ++    + HC++   E A +L+  G +IS+S +V
Sbjct: 121 RELHKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV 180

Query: 178 CF--SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDEYS 233
            F  +E  ++  + + L+ ++VETDSPYL+P+  +G++N+P  V +V E +  LK    +
Sbjct: 181 TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLK--GVA 238

Query: 234 MDEITKIIYNNTKRLYRI 251
           ++E+ +I  +N  RL+ I
Sbjct: 239 VEELAQITTDNFARLFHI 256