Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 257 a.a., Putative deoxyribonuclease YjjV from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 68/259 (26%), Positives = 132/259 (50%), Gaps = 17/259 (6%)

Query: 6   FKYIDSHCHVEDKSLNKYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKY-GIYVT 63
           +++ID+HCH +           ++RA E  V+ ++   T      R + L  ++  +Y  
Sbjct: 3   WRFIDTHCHFDFPPFTGDERASIQRACEAGVEKIIVPATEAAHFPRVLALAARFPSLYAA 62

Query: 64  LGYHPGRV--NADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFIN 119
           LG HP  +  +ADD++ +K+   + ++++ ++AVGEIGLD   D     RQE      + 
Sbjct: 63  LGLHPIVIERHADDDS-DKLQQAL-AQQQNVVAVGEIGLDLYRDDPQFARQERFLDAQLQ 120

Query: 120 LSKEVNKPVVIHARGMEERSYDILKNDVI---SMYHCYSGSLELAKELIKNGNFISYSTL 176
           L+K  + PV++H+R   ++    LK   +    + H ++GSL+ A+  ++ G  I     
Sbjct: 121 LAKRYDLPVILHSRRTHDKLAMHLKRQDLPRTGVVHGFAGSLQQAERFVRLGYKIGVGGT 180

Query: 177 VCFSEHHK--NLVKNLGLENVVVETDSP--YLSPIKGEKNEPKNVINVIETIWELKKDEY 232
           + +    K  +++  L L+ +++ETD+P   L   +G+ N P+    V + + EL+ +  
Sbjct: 181 ITYPRASKTRDVMARLPLDALLLETDAPDMPLKGFQGQPNRPEQAARVFDALCELRPE-- 238

Query: 233 SMDEITKIIYNNTKRLYRI 251
             + I   +Y NT  L+R+
Sbjct: 239 PAEVIADTLYRNTITLFRL 257