Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 259 a.a., predicted DNase (NCBI) from Escherichia coli BW25113

 Score =  107 bits (268), Expect = 2e-28
 Identities = 72/260 (27%), Positives = 137/260 (52%), Gaps = 20/260 (7%)

Query: 7   KYIDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-IYVTL 64
           ++ID+HCH +    +   E  ++RA +  V +++   T   +  R + L E Y  +Y  L
Sbjct: 4   RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAAL 63

Query: 65  GYHPGRVNA-DDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLS 121
           G HPG +    D ++E++   +  +  +++AVGEIGLD   D    ERQ+ +  + + L+
Sbjct: 64  GLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLA 123

Query: 122 KEVNKPVVIHAR------GMEERSYDILKNDVISMYHCYSGSLELAKELIKNGNFISYST 175
           K  + PV++H+R       M  + +D+ +  V+   H +SGSL+ A+  ++ G  I    
Sbjct: 124 KRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVV---HGFSGSLQQAERFVQLGYKIGVGG 180

Query: 176 LVCFSEHHK--NLVKNLGLENVVVETDSP--YLSPIKGEKNEPKNVINVIETIWELKKDE 231
            + +    K  +++  L L ++++ETD+P   L+  +G+ N P+    V   + EL+++ 
Sbjct: 181 TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRRE- 239

Query: 232 YSMDEITKIIYNNTKRLYRI 251
              DEI + + NNT  L+ +
Sbjct: 240 -PADEIAQALLNNTYTLFNV 258