Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 260 a.a., DNase, magnesium-dependent (NCBI) from Escherichia coli BW25113

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 18/220 (8%)

Query: 22  KYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKYG-IYVTLGYHPGRVNADDNAIE 79
           K R+D+V  AF+  V  ++ +GTNL   ++A +L  +Y   + T G HP   +    A E
Sbjct: 15  KDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATE 74

Query: 80  KVYNFIRSKEKEILAVGEIGLDFDAE--NIERQENIFKKFINLSKEVNKPVVIHARGMEE 137
           +    + + + E++A+GE GLDF+      E QE  F   + ++ ++N PV +H R   E
Sbjct: 75  EAIIELAA-QPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHE 133

Query: 138 RSYDILKN--DVI--SMYHCYSGSLELAKELIKNGNFISYSTLVCFSEHHKNLVKNLGL- 192
           R   +L+   D +  ++ HC++G+ E  +  + +G +I  +  VC       L + L L 
Sbjct: 134 RFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLI 193

Query: 193 --ENVVVETDSPYLSP------IKGEKNEPKNVINVIETI 224
             E +++ETD+PYL P          +NEP ++ ++++ I
Sbjct: 194 PAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRI 233