Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 264 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Erwinia tracheiphila SCR3

 Score = 72.8 bits (177), Expect = 7e-18
 Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 26/243 (10%)

Query: 24  REDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKYGIYV--TLGYHPGRVNADDNAIEK 80
           R+ +VKRA +  V  ++ +GTN    ++A  L  +   Y   T G HP   +A + + E 
Sbjct: 17  RDWVVKRAKQAGVTGLLITGTNALESQQAQSLAARSPGYCWSTAGVHPH--HASEWSGET 74

Query: 81  VYNFIRSKEK-EILAVGEIGLDFD--AENIERQENIFKKFINLSKEVNKPVVIHARGMEE 137
           V    R  E  E++A+GE GLDF+      E+Q   F   + L+ E+N P  +H R   +
Sbjct: 75  VSTLKRLAESPEVVAIGECGLDFNRNVSEPEQQAYAFNAQLELAAELNLPAFLHCREAHD 134

Query: 138 RSYDI----LKNDVISMYHCYSGSLELAKELIKNGNFISYSTLVCFSEHHK---NLVKNL 190
           R  +I    L     ++ HC++G+    +  +  G  I  +  +C     K    LV  +
Sbjct: 135 RFIEILTPWLPKLAGAVIHCFTGTKTELEACLDLGLSIGITGWICDERRGKPLRELVPLI 194

Query: 191 GLENVVVETDSPYLSP------IKGEKNEPKNVINVIETIWELKKDEYSM-----DEITK 239
               +++ETD+PYL P          +NEP  + +++E + EL+K++ ++     DE  +
Sbjct: 195 PAGRLLLETDAPYLIPRDLRPRPPSRRNEPGFLPHIVEQVAELRKEDAAVLGRQSDENAR 254

Query: 240 IIY 242
           +++
Sbjct: 255 LLF 257