Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 260 a.a., metal-dependent hydrolase from Escherichia coli ECRC62

 Score =  106 bits (265), Expect = 4e-28
 Identities = 71/260 (27%), Positives = 137/260 (52%), Gaps = 20/260 (7%)

Query: 7   KYIDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-IYVTL 64
           ++ID+HCH +    +   E  ++RA +  V +++   T   +  R   L EKY  +Y  L
Sbjct: 4   RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLYAAL 63

Query: 65  GYHPGRVNA-DDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLS 121
           G HPG +    D +++++   +  +  +++AVGEIGLD   D    ERQ+ +  + + L+
Sbjct: 64  GLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLA 123

Query: 122 KEVNKPVVIHAR------GMEERSYDILKNDVISMYHCYSGSLELAKELIKNGNFISYST 175
           K  + PV++H+R       M  + +D+ +  V+   H +SGSL+ A+  ++ G  I    
Sbjct: 124 KRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVV---HGFSGSLQQAERFVQLGYKIGVGG 180

Query: 176 LVCFSEHHK--NLVKNLGLENVVVETDSP--YLSPIKGEKNEPKNVINVIETIWELKKDE 231
            + +    K  +++  L L ++++ETD+P   L+  +G+ N P+    V   + EL+ + 
Sbjct: 181 TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQANRPEQAARVFAVLCELRSE- 239

Query: 232 YSMDEITKIIYNNTKRLYRI 251
              DEI +++ NNT  ++ +
Sbjct: 240 -PADEIAEVLLNNTYAVFSV 258