Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 260 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Escherichia coli ECRC62

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 18/220 (8%)

Query: 22  KYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKYG-IYVTLGYHPGRVNADDNAIE 79
           K R+D+V RAF+  V  ++ +GTNL   ++A +L  +Y   + T G HP   +    A E
Sbjct: 15  KDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATE 74

Query: 80  KVYNFIRSKEKEILAVGEIGLDFDAE--NIERQENIFKKFINLSKEVNKPVVIHARGMEE 137
           +    + + + E++A+GE GLDF+      E QE  F   + ++ E+N PV +H R   E
Sbjct: 75  EAIIELAA-QPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAAELNMPVFMHCRDAHE 133

Query: 138 RSYDILKN--DVI--SMYHCYSGSLELAKELIKNGNFISYSTLVCFSEHHKNLVKNLGL- 192
           R   +L+   D +  ++ HC++G+ E  +  +  G +I  +  VC       L + L L 
Sbjct: 134 RFMTLLEPWLDKLPGAVLHCFTGTREEMQACVARGIYIGITGWVCDERRGLELRELLPLI 193

Query: 193 --ENVVVETDSPYLSP------IKGEKNEPKNVINVIETI 224
             E +++ETD+PYL P          +NEP ++ ++++ I
Sbjct: 194 PAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRI 233