Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 260 a.a., metal-dependent hydrolase from Escherichia coli ECRC101

 Score =  100 bits (250), Expect = 2e-26
 Identities = 69/257 (26%), Positives = 132/257 (51%), Gaps = 14/257 (5%)

Query: 7   KYIDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-IYVTL 64
           ++ID+HCH +        E  ++RA +  V +++   T   +  R   L E Y  +Y  L
Sbjct: 4   RFIDTHCHFDFPPFIGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAENYQPLYAAL 63

Query: 65  GYHPGRVNA-DDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLS 121
           G HPG +    D +++++   +  +  +++AVGE GLD   D    ERQ+    + + L+
Sbjct: 64  GLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGESGLDLFGDDPQFERQQWFLDEQLKLA 123

Query: 122 KEVNKPVVIHARGMEERSYDILKNDVIS---MYHCYSGSLELAKELIKNGNFISYSTLVC 178
           K  + PV++H+R   ++    LK   +S   + H +SGSL+ A+  ++ G  I     + 
Sbjct: 124 KRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGSLQQAERFVQLGYKIGVGGTIT 183

Query: 179 FSEHHKN--LVKNLGLENVVVETDSP--YLSPIKGEKNEPKNVINVIETIWELKKDEYSM 234
           +    K   ++  L L ++++ETD+P   L+  +G+ N P+    V + + EL+ +    
Sbjct: 184 YPRASKTRVVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCELRPE--PE 241

Query: 235 DEITKIIYNNTKRLYRI 251
           DEI +++ NNT  ++ +
Sbjct: 242 DEIAEVLLNNTYAVFNV 258