Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 259 a.a., metal-dependent hydrolase from Escherichia coli ECOR38

 Score =  105 bits (262), Expect = 9e-28
 Identities = 70/257 (27%), Positives = 137/257 (53%), Gaps = 14/257 (5%)

Query: 7   KYIDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-IYVTL 64
           ++ID+HCH +    +   E  ++RA +  V +++   T   +  R   L EKY  +Y  L
Sbjct: 4   RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLYAAL 63

Query: 65  GYHPGRVNA-DDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLS 121
           G HPG +    D +++++   +     +++AVGEIGLD   D    ERQ+ +  + + L+
Sbjct: 64  GLHPGMLEKHSDVSLDQLQQALERHPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLA 123

Query: 122 KEVNKPVVIHARGMEER-SYDILKNDV--ISMYHCYSGSLELAKELIKNGNFISYSTLVC 178
           K  + PV++H+R   ++ +  + ++D+    + H +SGSL+ A+  ++ G  I     + 
Sbjct: 124 KRYDLPVILHSRRTHDKLAMHLKRHDLPCTGVVHGFSGSLQQAERFVQLGYKIGVGGTIT 183

Query: 179 FSEHHK--NLVKNLGLENVVVETDSP--YLSPIKGEKNEPKNVINVIETIWELKKDEYSM 234
           +    K  +++  L L ++++ETD+P   L+  +G+ N P+    V   + EL+ +    
Sbjct: 184 YPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRPE--PA 241

Query: 235 DEITKIIYNNTKRLYRI 251
           DEI +++ NNT  L+ +
Sbjct: 242 DEIAEVLLNNTYTLFNV 258