Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 264 a.a., putative metal-dependent hydrolase YcfH from Azospirillum sp. SherDot2

 Score =  120 bits (302), Expect = 2e-32
 Identities = 80/255 (31%), Positives = 144/255 (56%), Gaps = 17/255 (6%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-IYVTLGY 66
           +DSHCH++     +  + +V RA +  + +MVT  T +    R + + E+Y  I  T+G 
Sbjct: 3   VDSHCHLDFPDFAEELDAVVDRARQAGIGRMVTICTYISRFDRILAVAERYDDILCTVGV 62

Query: 67  HPGRVNADDNAIEKVYNFIR-SKEKEILAVGEIGLDF--DAENIERQENIFKKFINLSKE 123
           HP +  A++ AI  V   +  S+  +++ +GE GLD+  D    ++Q+  F++ I  S E
Sbjct: 63  HPHQA-AEEFAITTVDRLVELSRHPKVIGLGETGLDYFYDKSPRDQQQECFRRHIRASLE 121

Query: 124 VNKPVVIHARGMEERSYDILKND-----VISMYHCYSGSLELAKELIKNGNFISYSTLVC 178
              P++IH R  ++ +  I+K +     V  + HC+S    LA+E ++ G  +S S +V 
Sbjct: 122 TGLPLIIHTRDADDDTMRIVKEEAAGQPVKGLLHCFSSGRALAEEAVEYGFTLSLSGIVT 181

Query: 179 F--SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDEYSM 234
           F  SE  + +VK++ L+ ++VETD+PYL+PI  +G++NEP  V +    + E+K    S 
Sbjct: 182 FKKSEELRAIVKDVPLDRILVETDAPYLAPIPFRGKRNEPAYVAHTAACVAEVK--GVSA 239

Query: 235 DEITKIIYNNTKRLY 249
           +E+ ++  +N  RL+
Sbjct: 240 EELARVTTDNFFRLF 254