Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 260 a.a., putative deoxyribonuclease YcfH from Alteromonas macleodii MIT1002

 Score =  100 bits (249), Expect = 3e-26
 Identities = 76/261 (29%), Positives = 137/261 (52%), Gaps = 26/261 (9%)

Query: 8   YIDSHCHVEDKSLNKYREDIVK-------RAFEKKVQMVTSGTNLGSCRRAVELKEKYGI 60
           ++DSHCH++   L +  E++ +       R  E  + +  S  +  S   AV   E   +
Sbjct: 2   FVDSHCHLD--RLKQGPEELAETLNFARTRGVEHFLCVCVSVGDYDSMLAAVSQFED--V 57

Query: 61  YVTLGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFI 118
            V+ G HP      D A        +++ +E++A+GE GLD+    E+ E Q   F   I
Sbjct: 58  SVSCGVHPLH---QDEACSYEELLEKAQREEVVAIGETGLDYFYSPESKEVQLTSFVDHI 114

Query: 119 NLSKEVNKPVVIHARGMEERSYDILKNDVIS----MYHCYSGSLELAKELIKNGNFISYS 174
            ++ E  KP++IH R   E + ++L+    +    + HC++ SL++A   I+   +IS S
Sbjct: 115 KVANETKKPLIIHTRDAREDTINLLRQHKAAHTKGVLHCFTESLDMALAAIEMDFYISIS 174

Query: 175 TLVCFS--EHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKD 230
            +V F+  +  + +VK + LE +++ETDSP+L+P+  +G++N+P  V+ V E I ELK  
Sbjct: 175 GIVTFNSADELREVVKEIPLERLLIETDSPWLAPVPHRGKQNQPGYVVEVAEFIAELK-- 232

Query: 231 EYSMDEITKIIYNNTKRLYRI 251
             ++ E+ +I   N   L+ +
Sbjct: 233 GVTVKELAEITTQNFYTLFSL 253