Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 260 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  115 bits (289), Expect = 7e-31
 Identities = 76/245 (31%), Positives = 135/245 (55%), Gaps = 16/245 (6%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKY-GIYVTLGY 66
           ID+HCH++       R+DI+ RA    V QMVT  T +      +++ +KY  ++ ++G 
Sbjct: 3   IDTHCHLDFPDFEAERDDIIARAHASGVSQMVTISTRVRRLPELLKIADKYPSVFCSVGT 62

Query: 67  HPGRVNAD-DNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLSKE 123
           HP   + + D + +++     S +K I+A+GE GLD+  D +  E Q+    + I  ++ 
Sbjct: 63  HPNNADEELDISADELVRLAESHDK-IVAIGEAGLDYFYDTQKPEDQKTGLIRHIEAARR 121

Query: 124 VNKPVVIHARGMEERSYDIL-----KNDVISMYHCYSGSLELAKELIKNGNFISYSTLVC 178
              P+VIH+R  ++    IL     K     + HC+S   ELAK  ++ G ++S+S ++ 
Sbjct: 122 TKLPLVIHSRSADDDMAAILRAESGKGAFPFILHCFSAGPELAKAGVELGGYVSFSGILT 181

Query: 179 F--SEHHKNLVKNLGLENVVVETDSPYLSP--IKGEKNEPKNVINVIETIWELKKDEYS- 233
           F  S+  +++   + L+ ++VETD+PYL+P   +G++NEP  V+N  E + E+    +  
Sbjct: 182 FPKSQDIRDIAATVPLDRLLVETDAPYLAPKRWRGKRNEPSYVVNTAEVLAEVHGVSFEH 241

Query: 234 MDEIT 238
           M EIT
Sbjct: 242 MAEIT 246