Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 377 a.a., signal recognition particle-docking protein FtsY from Rhodanobacter sp000427505 FW510-R12

 Score =  140 bits (352), Expect = 9e-38
 Identities = 90/281 (32%), Positives = 150/281 (53%), Gaps = 20/281 (7%)

Query: 25  KLVKEVIKDIQKALIQSDVNVK----LVFNMSKEIERKAIDEAPPKGLSKKEHIVKIVYD 80
           KL  +++ +++ ALI +DV ++    LV ++ K + ++   +AP         ++  +  
Sbjct: 94  KLDDDLLDELETALITADVGIEASTELVESLRKRMHKREFADAPA--------LLAALRQ 145

Query: 81  ELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKLARYIQKKGLRPGLIAADVYR 140
            L+ LL    Q L++D  K  V+L++GI G+GKTT+  KLAR  + +     L A D +R
Sbjct: 146 ALLALLKPVEQPLQVDGRKPFVVLVVGINGAGKTTTIGKLARRWRDEQRAVMLAAGDTFR 205

Query: 141 PAAYQQLKQLSEKINVPLFGD-ETRTKTPVEITKEGMEKLKKVDVIIIDTAGRHKEEEGL 199
            AA +QLK   ++  VP+    +      V        + +  D++I DTAGR   + GL
Sbjct: 206 AAAVEQLKTWGKRNAVPVISQGQDADAASVIFDALQAARSRGADLLIADTAGRLHTQGGL 265

Query: 200 LAEMKEMK------DLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSA 253
           + E+ ++       D   P+E+++VIDGT GQ A +Q + F++ V   G + VTKLDG+A
Sbjct: 266 MDELGKIARVLKKLDADAPHEVLMVIDGTTGQNAVSQVRQFRQIVGVTG-LAVTKLDGTA 324

Query: 254 KGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRIL 294
           KGG   +   E   PI+F+G GE   +L  F+   F+  +L
Sbjct: 325 KGGVVFALAREFGLPIRFVGLGESATDLRPFEAAAFVDGLL 365