Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 459 a.a., signal recognition particle protein from Rhodanobacter sp000427505 FW510-R12

 Score =  273 bits (697), Expect = 1e-77
 Identities = 154/456 (33%), Positives = 268/456 (58%), Gaps = 18/456 (3%)

Query: 1   MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           M + L Q L+  +N+L+    + ++ ++E +++++ AL+++DV + +V  + + I+ +A+
Sbjct: 1   MFESLSQRLATTVNRLRGRGRLTEENIREALREVRIALLEADVALPVVQALIQRIKVRAV 60

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
            +   K LS  + ++K+V DEL  ++G    +L L     +V+L+ G+QG+GKTT+ AKL
Sbjct: 61  GQDVIKSLSPSQALIKVVSDELTVVMGTANTELNLAQQPPAVVLMAGLQGAGKTTTVAKL 120

Query: 121 ARYI-QKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKL 179
           AR + ++K  +  +++ DVYRPAA +QL+ L+E++ V  F   T  + PV+I K+ +   
Sbjct: 121 ARLLTERKKKKVMVVSCDVYRPAAIEQLRTLAEQVGVKFFPSAT-GQDPVQIAKDAIAAA 179

Query: 180 KK--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKES 237
           ++  VDV+++DTAGR   +E ++AE+K +     P E + V+D   GQ A N AKAF E+
Sbjct: 180 RREVVDVLLVDTAGRLHVDETMMAEIKALHAAITPIETLFVVDSMTGQDAANTAKAFNEA 239

Query: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
           +   G +++TK DG A+GG ALS       PIKF+G GE  D LE F P +   RILG+G
Sbjct: 240 LPLTG-VILTKTDGDARGGAALSVRYVTGKPIKFLGAGEKTDALEPFHPDRLAQRILGMG 298

Query: 298 DLDSLLEKTEDIMDESTEESI-DSILKGK-FTLIELYAQLETISKMGPMKQILSMIPGMG 355
           D+ SL+E+ E  +D+   + +   ++KGK F L ++  QLE +  MG +  ++  +PG+ 
Sbjct: 299 DVLSLVEEVERKVDQDKAQKLAQKVMKGKRFDLNDMRDQLEQMGNMGGLAGLMDKLPGVS 358

Query: 356 GNMPKEAAQLTEAKLKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDLLK 415
                  +++ + +++R   ++ SMT +E+ +P+L+  SR  R+A+G+G +  ++  LLK
Sbjct: 359 SLPDSVKSKVNDGEMRRMIAIIGSMTKKERRHPDLLNGSRRARVARGSGTQPADVNRLLK 418

Query: 416 YYSTTKNAFGNLK-----------RGKMPKMGGQMG 440
            Y   +     L            RG M  MGG  G
Sbjct: 419 QYMQMEKMMSKLSKGGSKGLLRQMRGAMKGMGGMGG 454