Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 461 a.a., cell division protein FtsY from Pseudomonas simiae WCS417

 Score =  159 bits (403), Expect = 1e-43
 Identities = 95/304 (31%), Positives = 171/304 (56%), Gaps = 25/304 (8%)

Query: 2   LDKLGQNLSDALNKLKNATFVDKKLVK-EVIKDIQKALIQSDVNVK----LVFNMSKEIE 56
           L K   ++ + +  L    F+ KK++  E+++DI+  L+ +DV V+    ++ ++++++ 
Sbjct: 164 LSKTSASIGEGMASL----FLGKKVIDDELLEDIETRLLTADVGVEATAVIIQSLTQKVA 219

Query: 57  RKAIDEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTS 116
           RK + +A        + + K +  EL  +L      L + P K  VIL++G+ G+GKTT+
Sbjct: 220 RKQLTDA--------DALYKSLQAELAAMLKPVEAPLVITPKKPFVILVVGVNGAGKTTT 271

Query: 117 AAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDET-RTKTPVEITKEG 175
             KLA+ +Q +G +  L A D +R AA +QL+   E+  +P+    T      V      
Sbjct: 272 IGKLAKKLQSEGKKVMLAAGDTFRAAAVEQLQVWGERNKIPVIAQHTGADSASVIFDAVQ 331

Query: 176 MEKLKKVDVIIIDTAGRHKEEEGLLAEMKEMK------DLTNPNEIILVIDGTLGQQAKN 229
             K + +DV+I DTAGR   ++ L+ E+K+++      D   P+E++LV+D   GQ A +
Sbjct: 332 AAKARNIDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDADAPHEVLLVLDAGTGQNAIS 391

Query: 230 QAKAFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKF 289
           QAK F ++V ++  + +TKLDG+AKGG   +   +   PI++IG GEG+D+L  F+ + F
Sbjct: 392 QAKQFNQTV-QLTGLALTKLDGTAKGGVIFALAKQFGLPIRYIGVGEGIDDLRTFEAEPF 450

Query: 290 ISRI 293
           +  +
Sbjct: 451 VQAL 454