Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 505 a.a., signal recognition particle-docking protein FtsY from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  150 bits (380), Expect = 7e-41
 Identities = 95/301 (31%), Positives = 165/301 (54%), Gaps = 18/301 (5%)

Query: 2   LDKLGQNLSDALNKLKNATFVDKKLVKE-VIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           L K   ++ + +  L    F+ KK + + ++++I+  L+ +DV V+    + K + +K  
Sbjct: 207 LSKTSASIGEGMASL----FLGKKAIDDDLLEEIETRLLTADVGVEATSVIIKSLTQKVA 262

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKS-VILLIGIQGSGKTTSAAK 119
                K L+  + +   +  EL  +L    Q L +    K  VIL++G+ G+GKTT+  K
Sbjct: 263 R----KQLTDAQALYTSLQGELAAMLKPVEQPLVIKAEHKPFVILVVGVNGAGKTTTIGK 318

Query: 120 LARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDET-RTKTPVEITKEGMEK 178
           LA+ +Q +G +  L A D +R AA +QL+   E+ ++P+    T      V        K
Sbjct: 319 LAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNHIPVIAQHTGADSASVIFDAVQAAK 378

Query: 179 LKKVDVIIIDTAGRHKEEEGLLAEMKEMK------DLTNPNEIILVIDGTLGQQAKNQAK 232
            + +DV+I DTAGR   ++ L+ E+K+++      D   P+E++LV+D   GQ A NQAK
Sbjct: 379 ARGIDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDADAPHEVLLVLDAGTGQNAINQAK 438

Query: 233 AFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISR 292
            F ++V+  G + +TKLDG+AKGG   +   +   PI++IG GEG+D+L  F+ + F+  
Sbjct: 439 QFNQTVTLTG-LALTKLDGTAKGGVIFALAKQFGLPIRYIGVGEGIDDLRTFEAEPFVQA 497

Query: 293 I 293
           +
Sbjct: 498 L 498