Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 494 a.a., Signal Recognition Particle protein translocation receptor GTPase from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 3e-44
 Identities = 102/310 (32%), Positives = 175/310 (56%), Gaps = 26/310 (8%)

Query: 2   LDKLGQNLSDALNKLKNATFVDKKLVKE-VIKDIQKALIQSDVNVK----LVFNMSKEIE 56
           L K   ++ + +  L    F+ KK++ + ++ +I+  L+ +DV V+    +V N+++++ 
Sbjct: 198 LSKTSASIGEGMASL----FLGKKVIDDDLLDEIETRLLTADVGVEATSAIVQNLTQKVA 253

Query: 57  RKAIDEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKS-VILLIGIQGSGKTT 115
           RK + +A        + + K + +EL  LL    Q L +    K  VIL++G+ G+GKTT
Sbjct: 254 RKQLADA--------DALYKSLQEELAALLRPVEQPLNVQAQNKPYVILVVGVNGAGKTT 305

Query: 116 SAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTP-VEITKE 174
           +  KLA+ +Q +G +  L A D +R AA +QL+   E+  +P+    T   +  V     
Sbjct: 306 TIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVIFDAV 365

Query: 175 GMEKLKKVDVIIIDTAGRHKEEEGLLAEMKEMK------DLTNPNEIILVIDGTLGQQAK 228
              K + VDV+I DTAGR   ++ L+ E+K+++      D+  P+E++LV+D   GQ A 
Sbjct: 366 QAAKARGVDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDVEAPHEVLLVLDAGTGQNAI 425

Query: 229 NQAKAFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKK 288
           +QAK F +SV E+  + +TKLDG+AKGG   +   + N PI+FIG GEG+D+L  F+ + 
Sbjct: 426 SQAKYFNQSV-ELTGLALTKLDGTAKGGVIFALAKQFNIPIRFIGVGEGIDDLRTFEAEP 484

Query: 289 FISRILGLGD 298
           F+  +    D
Sbjct: 485 FVKALFAERD 494