Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 319 a.a., signal recognition particle-docking protein FtsY from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  145 bits (367), Expect = 1e-39
 Identities = 100/304 (32%), Positives = 165/304 (54%), Gaps = 22/304 (7%)

Query: 2   LDK-LGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           LDK L +  S+   +L  A      +  EV+ ++++ L+ +DV V+    +   IE++  
Sbjct: 16  LDKGLEKTKSNFFGQLSKAVMGKSTVDVEVLDELEEILVHADVGVETTVKIIDRIEKRV- 74

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQ----KLELDPS-KKSVILLIGIQGSGKTT 115
             A  K +S  E +  I+ +E+  LL E         +L    K  VI+++G+ G GKTT
Sbjct: 75  --ARDKYVSTDE-LDNILREEIAALLEENRAGDGANFDLPADIKPYVIMVVGVNGVGKTT 131

Query: 116 SAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRT---KTPVEIT 172
           +  KLA    K G +  L AAD +R AA  QL    E++ VP+      T       +  
Sbjct: 132 TIGKLAAQFHKAGKKVVLGAADTFRAAAVDQLIIWGERVGVPVISHGMNTDPASVAYDAV 191

Query: 173 KEGMEKLKKVDVIIIDTAGRHKEEEGLLAEMKEMKDLTN------PNEIILVIDGTLGQQ 226
           K+G+E     DV+IIDTAGR   + GL+ E+ ++K +        P+E++LV+DG+ GQ 
Sbjct: 192 KKGVEL--NADVVIIDTAGRLHNKVGLMNELSKIKRVMQKITPDTPHEVLLVLDGSTGQN 249

Query: 227 AKNQAKAFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDP 286
           A  QA+ F ++ +++ ++ +TKLDG+AKGG  +    E   P+K+IG GE +++L+ FD 
Sbjct: 250 ALLQAREFTKA-TDVTALAITKLDGTAKGGVVIGISDEFKIPVKYIGVGEKIEDLQLFDK 308

Query: 287 KKFI 290
            +F+
Sbjct: 309 NEFV 312