Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 444 a.a., signal recognition particle protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  286 bits (731), Expect = 1e-81
 Identities = 172/449 (38%), Positives = 262/449 (58%), Gaps = 17/449 (3%)

Query: 1   MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           M D L   L  A   LK    + +  V   IK++++AL+ +DVN K+  +++  I+ KA+
Sbjct: 1   MFDNLSNKLDRAFKTLKGQGNITEINVATTIKEVRRALVDADVNYKVAKSVTDNIKEKAL 60

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLEL--DPSKKSVILLIGIQGSGKTTSAA 118
                  +S  + +VKI+++EL +L+G   + + L  DP+   VIL+ G+QGSGKTT   
Sbjct: 61  GRDVLIAVSPGQLMVKIMHEELTELMGGEKKDVNLKGDPA---VILISGLQGSGKTTFTG 117

Query: 119 KLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEK 178
           KLA YI+K+G    + A DVYRPAA  QL+ L+E++ V  +  E   K PV+I    +E 
Sbjct: 118 KLANYIKKQGRSVMVAACDVYRPAAINQLQVLAEQVGVEAY-TELENKNPVQIALNAIEH 176

Query: 179 LKKVD--VIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKE 236
            KK    V+IIDTAGR   +E ++ E+ E+K   NP E + V+D   GQ A N AK F E
Sbjct: 177 AKKTHKKVVIIDTAGRLAVDEAMMNEIAEIKKAINPTETLFVVDSMTGQDAVNTAKTFNE 236

Query: 237 SVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGL 296
            ++  G +L TKLDG ++GG ALS  A +  PIKFI TGE ++ L+ F P +   RILG+
Sbjct: 237 RINFDGVVL-TKLDGDSRGGAALSIRAVVEKPIKFISTGEKMEALDLFYPDRMAQRILGM 295

Query: 297 GDLDSLLEKTEDIMDESTEESID-SILKGKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
           GD+ SL+E+ +   DE   + I+  I K +F   +   QLE I KMG +K ++ MIPG+G
Sbjct: 296 GDVISLVERAQQAFDEDEAKRINKKIRKNQFNFDDFLTQLEQIKKMGDIKDLVGMIPGVG 355

Query: 356 GNMPKEAAQLTEAKLKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDLLK 415
             +  +  ++ E   K  + ++ SMT EE+ENP++I  SR  RIAKG+G   +++ +L+K
Sbjct: 356 KAL--KDVEIDENAFKPIEAIIKSMTKEERENPDMISGSRRARIAKGSGTDIQQVNNLMK 413

Query: 416 YYSTTKNAFGNL-----KRGKMPKMGGQM 439
            ++  +    ++     KRG +  M   M
Sbjct: 414 QFNDMRKMMRSMNKMAGKRGGLSNMANLM 442