Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

 Score =  119 bits (298), Expect = 2e-31
 Identities = 82/278 (29%), Positives = 144/278 (51%), Gaps = 16/278 (5%)

Query: 27  VKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAIDEAPPKGLSKKEHIVKIVYDELVK-- 84
           +++V+++++  L ++DV   +V  + + ++ + +       +S K+   +I  + L K  
Sbjct: 97  IEDVLEEMEMELFEADVAFDVVEKIIESLKNQLVGLK----ISAKDDPEEITINALKKSI 152

Query: 85  ---LLGETTQKLELDPSKKS-----VILLIGIQGSGKTTSAAKLARYIQKKGLRPGLIAA 136
              L  E      L   KK+     V+L +GI G+GKTTS +KLA  +++KG    + A 
Sbjct: 153 KGILSQEKIDVFNLIDEKKANGEPAVLLFVGINGTGKTTSISKLAYILKEKGYSAVMAAG 212

Query: 137 DVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKE-GMEKLKKVDVIIIDTAGRHKE 195
           D +R  A +QL++  +   + +   +    +   I       K K ++V++ DTAGR   
Sbjct: 213 DTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYDAISHAKAKGLNVVLADTAGRQTT 272

Query: 196 EEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKG 255
              L+ E+K++  +T P+ II V D   G  A +QA+ F  +++  G+IL TK D  AKG
Sbjct: 273 NINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFNNTININGAIL-TKTDADAKG 331

Query: 256 GGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRI 293
           G ALS    I  PI F+G G+   +L++FD    I ++
Sbjct: 332 GAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKL 369