Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 332 a.a., signal recognition particle-docking protein FtsY from Magnetospirillum magneticum AMB-1

 Score =  146 bits (368), Expect = 1e-39
 Identities = 89/302 (29%), Positives = 165/302 (54%), Gaps = 24/302 (7%)

Query: 4   KLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAIDEA 63
           KL Q L D   K        +KL  E +++++  LI +D+ V +   ++K + +    + 
Sbjct: 45  KLTQGLGDLFTK--------RKLDDEALEELEDLLITADLGVAMAARVTKHLAKTRFGQD 96

Query: 64  PPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKS-VILLIGIQGSGKTTSAAKLAR 122
                   + I   + +E+ ++L    + LE+D ++K  V+L++G+ GSGKTT+  K+A+
Sbjct: 97  VTS-----DEIKATLAEEITRILTPVAKPLEIDSTRKPHVVLVVGVNGSGKTTTIGKMAK 151

Query: 123 YIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGME--KLK 180
             +  GL   L A D +R AA +QLK   E+ + P+   ET       +  + +E  + +
Sbjct: 152 TYKDAGLNVTLAAGDTFRAAAVEQLKVWGERTHCPVIARETGADA-AGLAYDAVEQSRAR 210

Query: 181 KVDVIIIDTAGRHKEEEGLLAEMKEM------KDLTNPNEIILVIDGTLGQQAKNQAKAF 234
             D++ IDTAGR + +  L+AE+ ++       D T P++++LV+D T+GQ A +Q + F
Sbjct: 211 GDDLLFIDTAGRLQNKADLMAELAKLVRSIKKVDETAPHDVLLVLDATVGQNAHSQVEIF 270

Query: 235 KESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRIL 294
           K+ V+ +  +++TKLDG+A+GG  ++   +   P+  IG GE  ++L  F+   F   ++
Sbjct: 271 KDMVA-VSGLVLTKLDGTARGGVLVALAEKFGLPVHAIGIGEKAEDLRPFEADAFAKSLV 329

Query: 295 GL 296
           G+
Sbjct: 330 GM 331