Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 491 a.a., Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  153 bits (386), Expect = 1e-41
 Identities = 96/289 (33%), Positives = 159/289 (55%), Gaps = 20/289 (6%)

Query: 21  FVDKKLVKEVIKDIQKALIQSDVNV----KLVFNMSKEIERKAIDEAPPKGLSKKEHIVK 76
           F  KK+  ++ +++++ L+ +DV V    K++ N+++   RK + +A        E +  
Sbjct: 212 FRGKKIDDDLFEELEEQLLIADVGVETTRKIIANLTEGASRKQLKDA--------EALYG 263

Query: 77  IVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKLARYIQKKGLRPGLIAA 136
           ++ DE+ ++L +  + L ++     VIL++G+ G GKTT+  KLAR  +++G    L A 
Sbjct: 264 LLKDEMGEILAKVDEPLNIEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAG 323

Query: 137 DVYRPAAYQQLKQLSEKINVPLFGDET-RTKTPVEITKEGMEKLKKVDVIIIDTAGRHKE 195
           D +R AA +QL+   ++ N+P+    T      V        K + VDV+I DTAGR + 
Sbjct: 324 DTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNVDVLIADTAGRLQN 383

Query: 196 EEGLLAEMKE----MKDLTN--PNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKL 249
           +  L+ E+K+    MK L    P+E++L ID + GQ A +QAK F E+V   G I +TKL
Sbjct: 384 KSHLMEELKKIVRVMKKLDEEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTG-ITLTKL 442

Query: 250 DGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
           DG+AKGG   S   +   PI++IG GE +++L  F    FI  +    D
Sbjct: 443 DGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED 491