Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 458 a.a., signal recognition particle-docking protein FtsY from Dickeya dianthicola ME23

 Score =  150 bits (378), Expect = 1e-40
 Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 18/305 (5%)

Query: 2   LDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAID 61
           L K  QNL      L    F  KK+  ++  ++++ L+ +DV V+     +++I  +  +
Sbjct: 164 LVKTRQNLGSGFVGL----FRGKKIDDDLFDELEEQLLIADVGVET----TRKIIDRLTE 215

Query: 62  EAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKLA 121
            A  K L   E ++ ++  E+  +L +    L +D     VIL++G+ G GKTT+  KLA
Sbjct: 216 HASRKQLKDAEALIALLKTEMSDILAKVDAPLAIDSKTPFVILMVGVNGVGKTTTIGKLA 275

Query: 122 RYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGME--KL 179
           R  Q +G    L A D +R AA +QL+   ++ NVP+    T   +   +  + ++  K 
Sbjct: 276 RQYQAQGKSVMLAAGDTFRAAAVEQLQVWGQRNNVPVVAQHTGADS-ASVIFDALQAAKA 334

Query: 180 KKVDVIIIDTAGRHKEEEGLLAEMKE----MKDLTN--PNEIILVIDGTLGQQAKNQAKA 233
           + VDV+I DTAGR + +  L+ E+K+    MK L    P+E++L +D + GQ A +Q K 
Sbjct: 335 RGVDVLIADTAGRLQNKAHLMEELKKIVRVMKKLDEDAPHEVMLTLDASTGQNAVSQTKL 394

Query: 234 FKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRI 293
           F E+V  +  I +TKLDG+AKGG   +   +   PI++IG GE +D+L  F    FI  +
Sbjct: 395 FNEAVG-LNGITLTKLDGTAKGGVIFAIADQFGIPIRYIGVGESIDDLRPFKADDFIEAL 453

Query: 294 LGLGD 298
               D
Sbjct: 454 FARED 458