Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 453 a.a., signal recognition particle protein from Dickeya dianthicola ME23

 Score =  283 bits (724), Expect = 8e-81
 Identities = 159/440 (36%), Positives = 261/440 (59%), Gaps = 7/440 (1%)

Query: 1   MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           M + L   LS  L  +     + +  +K+ +++++ AL+++DV + +V +    ++ +A+
Sbjct: 1   MFENLTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFINRVKEQAV 60

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
                K L+  +  VKIV +ELV  +GE  Q L L     +V+L+ G+QG+GKTTS  KL
Sbjct: 61  GHDVNKSLTPGQEFVKIVQNELVAAMGEVNQALNLAAQPPAVVLMAGLQGAGKTTSVGKL 120

Query: 121 ARYIQKKGLRPGL-IAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGME-- 177
            +++++K  +  L ++ADVYRPAA +QL+ L++ + V  F  E   K P++I    ++  
Sbjct: 121 GKFLREKQKKKVLVVSADVYRPAAIKQLETLAQTVGVDFFPSEAHEK-PIDIVNRALQHA 179

Query: 178 KLKKVDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKES 237
           KLK  DV+++DTAGR   ++ ++ E+K++    NP E + V+D   GQ A N AKAF E+
Sbjct: 180 KLKFYDVLLVDTAGRLHVDDAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEA 239

Query: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
           +   G +++TK+DG A+GG ALS       PIKF+G GE  D LE F P +  SRILG+G
Sbjct: 240 LPLTG-VILTKIDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFYPDRIASRILGMG 298

Query: 298 DLDSLLEKTEDIMDESTEESIDSILK--GKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
           D+ SL+E+ E  +D +  E +   LK    F L +   QL+ +  MG M  ++S +PGMG
Sbjct: 299 DVLSLIEELESKVDRTQAEKLAKKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKLPGMG 358

Query: 356 GNMPKEAAQLTEAKLKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDLLK 415
                  +Q+ +  L R + +++SMT++E+  PE+IK SR +RIA GAG++ +++  LLK
Sbjct: 359 QIPDNMKSQMDDKVLVRMEAIINSMTLQERAKPEIIKGSRKRRIATGAGMQVQDVNRLLK 418

Query: 416 YYSTTKNAFGNLKRGKMPKM 435
            +   +     +K G + KM
Sbjct: 419 QFDDMQRMMKKMKNGGLAKM 438