Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 446 a.a., signal recognition particle protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  271 bits (693), Expect = 3e-77
 Identities = 163/442 (36%), Positives = 260/442 (58%), Gaps = 17/442 (3%)

Query: 1   MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           M D L   L  A   LK    + +  V   +K+I++ALI +DVN K+   ++  I+ +A+
Sbjct: 1   MFDNLSYKLDRAFKTLKGTGKITEINVATTVKEIRRALIDADVNYKVAKEVTDTIKSEAL 60

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLEL--DPSKKSVILLIGIQGSGKTTSAA 118
                  +S  + +VKI  +EL KL+G T + + L  DP+   VIL+ G+QGSGKTT + 
Sbjct: 61  GRDVLISVSPGQLLVKITQEELTKLMGGTKEDINLKGDPN---VILISGLQGSGKTTFSG 117

Query: 119 KLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEK 178
           KLA +++K+G +  L+A D+YRPAA +QLK L E+I V ++  E   K  ++I  + +  
Sbjct: 118 KLATHLKKQGRQVLLVACDIYRPAAIEQLKTLGEQIGVEVYA-EPENKNALDIASKAIAY 176

Query: 179 LKKVDV--IIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKE 236
            KK     +I+DTAGR   +E ++ E+ ++K+  +P E + V+D   GQ A N AK F E
Sbjct: 177 AKKNGKKNVIVDTAGRLAVDEQMMNEISDLKENLDPAETLFVVDSMTGQDAVNTAKTFDE 236

Query: 237 SVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGL 296
            + +   +++TKLDG  +GG A+S    ++ PIKFI TGE ++NL+ F P +   RILG+
Sbjct: 237 RL-DFDGVVLTKLDGDTRGGAAISIRHVVDKPIKFISTGEKMENLDVFYPDRMAQRILGM 295

Query: 297 GDLDSLLEKTEDIMDESTEESIDS-ILKGKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
           GD+ SL+EK +   DE   + I++ I K +F   +  +Q+E I KMG +K ++ MIPGMG
Sbjct: 296 GDVVSLVEKAQQSFDEDEAKRINAKIRKNQFNFDDFLSQIEQIKKMGNLKDLMGMIPGMG 355

Query: 356 GNMPKEAAQLTEAKLKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDLLK 415
             +  +   + +   K  + ++ SMT  E+ENP++I  SR +RIA G+G   +E+ +L+K
Sbjct: 356 KMI--KGLDIDDDSFKPIEAIIRSMTPLERENPDVIDGSRRKRIADGSGRSIQEVNNLMK 413

Query: 416 YYSTTKNAFGNLKRGKMPKMGG 437
            +   +         +M KMGG
Sbjct: 414 QFRDMRKMM-----KQMNKMGG 430