Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 498 a.a., Signal Recognition Particle (SRP) receptor from Escherichia coli BL21

 Score =  151 bits (381), Expect = 5e-41
 Identities = 92/289 (31%), Positives = 159/289 (55%), Gaps = 20/289 (6%)

Query: 21  FVDKKLVKEVIKDIQKALIQSDVNV----KLVFNMSKEIERKAIDEAPPKGLSKKEHIVK 76
           F  KK+  ++ +++++ L+ +DV V    K++ N+++   RK + +A        E +  
Sbjct: 219 FRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDA--------EALYG 270

Query: 77  IVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKLARYIQKKGLRPGLIAA 136
           ++ +E+ ++L +  + L ++     VIL++G+ G GKTT+  KLAR  +++G    L A 
Sbjct: 271 LLKEEMGEILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAG 330

Query: 137 DVYRPAAYQQLKQLSEKINVPLFGDET-RTKTPVEITKEGMEKLKKVDVIIIDTAGRHKE 195
           D +R AA +QL+   ++ N+P+    T      V        K + +DV+I DTAGR + 
Sbjct: 331 DTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQN 390

Query: 196 EEGLLAEMKEM------KDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKL 249
           +  L+ E+K++       D+  P+E++L ID + GQ A +QAK F E+V   G I +TKL
Sbjct: 391 KSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTG-ITLTKL 449

Query: 250 DGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
           DG+AKGG   S   +   PI++IG GE +++L  F    FI  +    D
Sbjct: 450 DGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED 498