Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 573 a.a., Signal recognition particle receptor FtsY from Alteromonas macleodii MIT1002

 Score =  149 bits (376), Expect = 2e-40
 Identities = 100/306 (32%), Positives = 169/306 (55%), Gaps = 24/306 (7%)

Query: 2   LDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAID 61
           L +  +NL   +  L    F  K +  E+ +D++  L+ +DV +    + +++I     D
Sbjct: 269 LSRTKENLGSGIVSL----FKGKTIDDELYEDLETQLLVADVGM----DTTQKIIDHLTD 320

Query: 62  EAPPKGLSKKEHIVKIVYDELVKLLGETTQKL-ELDPSKKS-----VILLIGIQGSGKTT 115
            A  K L   E +++I+  ++  +L +  Q L E+  +  S     VIL++G+ G GKTT
Sbjct: 321 SASRKDLKDAEALLEIMKQQMSGMLSQVNQPLSEVMQAHDSSEGPFVILMVGVNGVGKTT 380

Query: 116 SAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEG 175
           +  KLA+  Q++G +  L A D +R AA +QL+   E+ ++P+    T   +   +  + 
Sbjct: 381 TIGKLAKQFQQEGKKVMLAAGDTFRAAAVEQLQVWGERNDIPVIAQHTGADS-ASVLYDA 439

Query: 176 ME--KLKKVDVIIIDTAGRHKEEEGLLAEMKE----MKDL--TNPNEIILVIDGTLGQQA 227
           +E  K +  D++I DTAGR + +  L+ E+K+    MK +    P+E++L +D   GQ A
Sbjct: 440 LEAAKSRGTDILIADTAGRLQNKNNLMEELKKVVRVMKKINPNAPHEVMLTLDAGTGQNA 499

Query: 228 KNQAKAFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPK 287
            +QAK F E+V   G I +TKLDG+AKGG   S   +   PI++IG GE +D+L QFD +
Sbjct: 500 ISQAKLFNEAVGLTG-ITLTKLDGTAKGGVIFSIADKFKIPIRYIGVGESIDDLRQFDGQ 558

Query: 288 KFISRI 293
           +FI  +
Sbjct: 559 EFIDAL 564