Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 471 a.a., Signal recognition particle protein from Acinetobacter radioresistens SK82

 Score =  274 bits (701), Expect = 4e-78
 Identities = 154/453 (33%), Positives = 267/453 (58%), Gaps = 10/453 (2%)

Query: 1   MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           M D L + L+ +L  +  +  + +  +K+ +++++ AL+++DV + +      +++ +A+
Sbjct: 1   MFDTLTERLTQSLRNVTGSGQLTEDNIKDTLREVRMALLEADVALPVTREFIAKVKEQAL 60

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
            +     LS  +  VKIVYDEL K++GE  + L+L      ++LL G+QG+GKTT+AAKL
Sbjct: 61  GQEVMSQLSPGQAFVKIVYDELTKMMGEANESLDLAAKPPVIVLLAGLQGAGKTTTAAKL 120

Query: 121 ARYI-QKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGME-- 177
           AR++ +++  +  +++AD+YRPAA +QL+ ++ ++    F + +  + P+ I    +E  
Sbjct: 121 ARFLKERQKKKVAMVSADIYRPAAIKQLQTVANEVGAE-FIESSADEDPIVIANRAIEQA 179

Query: 178 KLKKVDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKES 237
           K+K  DV+I+DTAGR   ++ ++ E+K +     P E + V+D   GQ A N AKAF ++
Sbjct: 180 KIKFADVLIVDTAGRLHIDDDMMGEIKALHAAIQPTETLFVVDAMTGQDAANTAKAFNDA 239

Query: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
           +   G +++TK DG A+GG ALS  A    PIKF+G GE +D LE F P++   RILG+G
Sbjct: 240 LPLTG-VILTKTDGDARGGAALSVRAITGKPIKFLGMGEKLDALEPFHPERVAQRILGMG 298

Query: 298 DLDSLLEKTEDIMDESTEESIDSILK--GKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
           D+ SL+E+ E  +D+   E +   L+  G F   ++  Q E +SKMG M   L  +PGM 
Sbjct: 299 DVLSLVEEVERKIDKEKAEKMAKKLQKGGSFNFEDMLMQFEQMSKMGGMMGFLDKLPGMS 358

Query: 356 GNMPKEAAQLT--EAKLKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDL 413
            +  ++A +    E ++K+ + ++ SMT++E+ NP+LI  SR +RIA G G+   E+  L
Sbjct: 359 NSGIQQALEQANPEKQVKKMEAIIQSMTVKERRNPDLINPSRKKRIAAGCGMDVAEVNKL 418

Query: 414 LKYYSTTKNAFGNLKR-GKMPKMGGQMGQIMRQ 445
           +K ++              M KM   +G + +Q
Sbjct: 419 IKQHAQMAKMMKKFSNPAGMSKMMRSLGNLQKQ 451