Pairwise Alignments

Query, 334 a.a., 50S ribosomal protein L3 from Methanococcus maripaludis S2

Subject, 209 a.a., 50S ribosomal protein L3 from Escherichia coli ECRC62

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 33/204 (16%)

Query: 125 VDALDAVLEKATEVRAIVHTNPK----TTGIPKK----KPEVVEIRIGGSSVAE-----R 171
           V  ++    + T+V+ + +   +    TTG  K     KPE       G          R
Sbjct: 24  VTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFR 83

Query: 172 LAYAKEI-LGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRH 230
           LA  +E  +G+++++ ++F   + +D    +KGKGF G+VKRW  + Q   H      R 
Sbjct: 84  LAEGEEFTVGQSISV-ELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRV 142

Query: 231 TGSIGP-WRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNG 289
            GSIG    P +V     + GQMG  + T  +  ++++ +E                   
Sbjct: 143 PGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAE-----------------RN 185

Query: 290 YVVVKGTVQGPAKRLVVLRGSVRA 313
            ++VKG V G     ++++ +V+A
Sbjct: 186 LLLVKGAVPGATGSDLIVKPAVKA 209